BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027H08SP1|AL428807
(911 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1525 1743 0.0
>3x_Contig1525
Length = 8924
Score = 1743 bits (878), Expect = 0.0
Identities = 901/911 (98%)
Strand = Plus / Plus
Query: 1 acacaaacgcttcccaacacatctacagccactacttcaggcactggatttgtggtaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4678 acacaaacgcttcccaacacatctacagccactacttcaggcactggatttgtggtaccg 4737
Query: 61 accacaggaatatatggtcaatcgcttatttccaaagagaaacaggtctctctatcagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4738 accacaggaatatatggtcaatcgcttatttccaaagagaaacaggtctctctatcagca 4797
Query: 121 tatgcattcttatttcaatcaattgtatcctatcatcgtgattcttccaaaaacgtacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4798 tatgcattcttatttcaatcaattgtatcctatcatcgtgattcttccaaaaacgtacag 4857
Query: 181 gaaatcgaacggaaattaaacagctcaggatataccattggtatgagactcacagaaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4858 gaaatcgaacggaaattaaacagctcaggatataccattggtatgagactcacagaaata 4917
Query: 241 cttaatttcagagattcagtaccaaataaaacaggccttacaaacatggacagtgtcgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4918 cttaatttcagagattcagtaccaaataaaacaggccttacaaacatggacagtgtcgct 4977
Query: 301 gggacgataacaaacatgaaacgtcgcaatctaaagattctcgaaactttacagtacatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4978 gggacgataacaaacatgaaacgtcgcaatctaaagattctcgaaactttacagtacatc 5037
Query: 361 catttgaccgtttggcaatacctcttctctaggcccagcaatgacttagtaaaatcatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5038 catttgaccgtttggcaatacctcttctctaggcccagcaatgacttagtaaaatcatca 5097
Query: 421 gaacgtgacaatgagtacatgatcattgacaatgagccaacaatttcacagttcattcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5098 gaacgtgacaatgagtacatgatcattgacaatgagccaacaatttcacagttcattcag 5157
Query: 481 cacacttcagttcaatgtgaatccttcacttgtggaatcatcgaaggtttcctagatatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5158 cacacttcagttcaatgtgaatccttcacttgtggaatcatcgaaggtttcctagatatg 5217
Query: 541 gctggattcccatgtcacgtgacatctcatttcgttgaagagacgggcttctcaaataga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5218 gctggattcccatgtcacgtgacatctcatttcgttgaagagacgggcttctcaaataga 5277
Query: 601 acagtttacctgatacaattcgataaggctgtagtggaaagagagaacctcaggcaatga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5278 acagtttacctgatacaattcgataaggctgtagtggaaagagagaacctcaggcaatga 5337
Query: 661 taccgattagcaagcgcatcamgcgcggncacsaanancgaacaacctgtgatgactcag 720
||||||||||||||||||||| |||||| | ||||||||||||||||||||||
Sbjct: 5338 taccgattagcaagcgcatcaagcgcggcacgcgcaaacgaacaacctgtgatgactcag 5397
Query: 721 agtctgaactgttgcccttgagagcaaaatcgactaatgttaagaaaagaacaggattcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5398 agtctgaactgttgcccttgagagcaaaatcgactaatgttaagaaaagaacaggattcg 5457
Query: 781 ataagaacatcagattcttaggagatacaaattctgtaggaggaggcaaagctgacaaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5458 ataagaacatcagattcttaggagatacaaattctgtaggaggaggcaaagctgacaaat 5517
Query: 841 atatgaaacaggcagactataaggatagtgacaaccttctgtttgctagcgatcatgtat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5518 atatgaaacaggcagactataaggatagtgacaaccttctgtttgctagcgatcatgtat 5577
Query: 901 cgattcggttg 911
|||||||||||
Sbjct: 5578 cgattcggttg 5588
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5878
Number of Sequences: 1807
Number of extensions: 5878
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)